Services

Professional and Cost-Saving Solutions

Catalytic Activity and Kinetic Assays for Biocatalysts

Catalytic activity and kinetic assays are fundamental tools for the quantitative and qualitative evaluation of biocatalysts. Creative Enzymes provides comprehensive Catalytic Activity and Kinetic Assay Services for Biocatalysts, enabling accurate determination of enzymatic performance parameters such as Km, kcat, and Vmax under optimized reaction conditions. By integrating assay development, reaction condition optimization, and high-throughput analytical strategies, we support reliable characterization of diverse biocatalysts, including purified enzymes, engineered variants, and whole-cell systems. Our services are designed to generate reproducible, decision-ready data that guide enzyme selection, engineering, and process development for research, industrial biotechnology, and biopharmaceutical applications.

Cartoon nitrogenase with active site magnifiedFigure 1. Nitrogenase with active site.

Background: Importance of Catalytic Activity and Kinetic Assays in Biocatalysis Development

Catalytic assays are essential for understanding the functional behavior of biocatalysts. They enable the quantitative determination of enzymatic activity and the qualitative verification of enzyme presence in biological samples, tissues, or organisms. At the core of biocatalysis development, catalytic assays provide the key kinetic parameters—such as the Michaelis constant (Km), turnover number (kcat), and maximum reaction velocity (Vmax)—that define catalytic efficiency and substrate affinity.

Catalytic activity and kinetic assaysFigure 2. Enzyme kinetics. (Top) The two-step reaction equation used to describe enzyme catalyzed reactions. (Bottom) Every enzyme has a characteristic Km and Vmax. The Michaelis constant Km is the concentration of substrate needed to give a rate half that of Vmax.

Enzymes and biocatalysts vary widely in structure, stability, substrate specificity, and sensitivity to reaction conditions, making assay optimization essential even for well-established methodologies. Catalytic activity and kinetic measurements are strongly influenced by parameters such as pH, buffer composition, temperature, substrate and cofactor concentrations, enzyme loading, and the presence of stabilizers or inhibitors. Suboptimal assay design can mask true catalytic performance or lead to inaccurate kinetic constants.

As biocatalysis increasingly involves complex systems—including multi-enzyme cascades, immobilized enzymes, and whole-cell catalysts—robust and well-controlled assays are critical. Advanced analytical platforms such as fluorescence-based assays, mass spectrometry, and microfluidic technologies now enable precise, high-throughput evaluation of biocatalytic activity across both discovery and process development stages.

What We Offer: Comprehensive Catalytic Activity and Kinetic Assay Services

Creative Enzymes offers end-to-end Catalytic Activity and Kinetic Assay Services for Biocatalysts, supporting projects from early-stage enzyme screening to advanced process development.

Core Service Capabilities

Reaction condition optimization

Systematic evaluation of pH, temperature, buffer systems, ionic strength, and additives to identify optimal assay conditions.

Catalytic assay development and validation

Custom assay design based on enzyme class, substrate type, and detection strategy, followed by validation for accuracy, sensitivity, and reproducibility.

High-throughput assay strategy design

Development of scalable assays suitable for screening enzyme libraries, mutant panels, or substrate collections.

Assay evaluation and data interpretation

Rigorous analysis of kinetic data, including model fitting and statistical evaluation, to support confident decision-making.

Inquiry

Service Details: Technical Scope and Assay Capabilities

Types of Catalytic Assays

We support a broad range of catalytic assay formats, including but not limited to:

  • Continuous assays, monitoring product formation or substrate depletion in real time
  • Discontinuous (end-point) assays, suitable for slow reactions or unstable intermediates
  • Coupled assays, where product formation is linked to a secondary detectable reaction

Detection Technologies

To accommodate diverse substrates and reaction mechanisms, we employ multiple detection strategies:

  • UV–Vis spectrophotometry for chromogenic substrates
  • Fluorescence-based assays using labelled or probe-based substrates
  • Mass spectrometry (MS) for label-free detection of unmodified substrates and products
  • Chromatographic methods (HPLC/UPLC) for high specificity and quantitative accuracy

High-Throughput and Advanced Platforms

For enzyme screening and directed evolution projects, we design assays compatible with high-throughput formats:

  • Microplate-based assays (96-, 384-, or 1536-well formats)
  • Fluorescent or colorimetric readouts for rapid screening
  • Integration with microfluidic devices, enabling low-volume, parallelized enzyme assays

Microfluidic technologies are increasingly important for enzyme characterization, offering reduced reagent consumption, enhanced control of reaction conditions, and the ability to screen large parameter spaces efficiently.

Service Workflow

Workflow of catalytic activity and kinetic assays for biocatalysts service

Contact Our Team

Related Services

In addition to catalytic activity and kinetic assays for biocatalysts, Creative Enzymes also offers tailored enzyme-focused services, including enzyme activity measurement for reliable activity quantification, and specialized enzyme kinetics services for accurate determination of key kinetic parameters.

Why Choose Us: Advantages of Creative Enzymes' Catalytic Assay Services

Extensive Experience Across Enzyme Classes

Proven expertise with oxidoreductases, transferases, hydrolases, lyases, isomerases, and ligases.

Customized Assay Development

Each assay is tailored to the specific biocatalyst and application.

Integrated Optimization Strategy

Reaction conditions, detection methods, and kinetic analysis are optimized together.

Advanced Analytical Technologies

Access to fluorescence, MS-based, and microfluidic assay platforms.

High Data Reliability and Reproducibility

Rigorous validation ensures consistent and comparable results.

Actionable Results for Development Decisions

Clear interpretation of kinetic data to guide enzyme selection and engineering.

Case Studies: Representative Applications of Catalytic and Kinetic Assays

Case 1: Catalytic and Kinetic Evaluation of an (R)-Imine Reductase Biocatalyst

A recombinant whole-cell biocatalyst expressing an (R)-imine reductase ((R)-IRED) from Streptomyces sp. GF3587 was developed for the asymmetric reduction of prochiral imines. Catalytic activity screening demonstrated high activity and enantioselectivity across a panel of cyclic imines, enabling gram-scale synthesis of (R)-coniine with 90% yield and 99% ee. Detailed kinetic assays revealed significantly higher kcat values and lower KM compared to previously reported IREDs, with over 60-fold increased catalytic efficiency for selected substrates. These results highlight the value of robust catalytic activity and kinetic analysis in identifying high-performance biocatalysts for industrial applications.

Table 1. Kinetics data for cyclic imine substrates 1–7. (Hussain et al., 2015)

An (R)‐imine reductase biocatalyst for the asymmetric reduction of cyclic imines

Case 2: Functional and Structural Characterization of Plant meso-Diaminopimelate Decarboxylases

meso-Diaminopimelate decarboxylase catalyzes the final step of the diaminopimelate pathway for l-lysine biosynthesis and is a unique PLP-dependent enzyme acting on a D-stereocenter. While previously characterized only in prokaryotes, this study functionally and structurally characterizes two eukaryotic isoforms from Arabidopsis thaliana. Recombinant expression and kinetic analyses confirmed both isoforms as active enzymes, though less efficient than bacterial counterparts. High-resolution crystal structures revealed a homodimeric assembly and captured asymmetric ligand-bound and apo states. Structural insights suggest active-site conformational dynamics underlying stereochemical control, providing a basis for D-stereocenter selectivity during lysine biosynthesis in plants.

Structure–function analyses of two plant meso-diaminopimelate decarboxylase isoforms reveal that active-site gating provides stereochemical controlFigure 3. Enzyme kinetics of At-DAPDC1 and At-DAPDC2 measured using a DAPDC–SDH coupled assay. Reaction rates showed a linear dependence on enzyme concentration between 200–800 nM, and 550 nM was used for kinetic analysis. Initial rates were fitted to the Michaelis–Menten model, yielding high-quality fits. Dashed lines indicate Km (green) and Vmax (red). (Crowther et al., 2019)

FAQs: Frequently Asked Questions About Catalytic Activity and Kinetic Assays

  • Q: What information do catalytic assays provide?

    A: Catalytic assays quantify enzymatic activity and reveal how efficiently an enzyme converts substrates into products. Beyond activity measurements, these assays enable determination of key kinetic parameters such as Km, kcat, and Vmax, which are essential for comparing enzymes, evaluating mutations, and supporting process development and scale-up.
  • Q: Why is assay optimization necessary?

    A: Assay conditions strongly influence measured enzyme performance. Published protocols may not account for differences in substrates, cofactors, temperature, pH, or reaction matrices. Optimization ensures that assays accurately reflect true catalytic behavior under application-relevant conditions, resulting in reproducible and meaningful data.
  • Q: Can you develop assays for novel or engineered enzymes?

    A: Yes. We routinely design and validate customized assays for newly discovered, engineered, or low-characterization biocatalysts. This includes defining suitable substrates, detection methods, and kinetic models, even when no established assays are available.
  • Q: Are high-throughput assays available?

    A: Yes. We support multiple high-throughput formats, including microplate-based assays, fluorescence and absorbance detection, mass spectrometry–based methods, and microfluidic platforms, enabling rapid screening of large enzyme libraries or reaction conditions.
  • Q: Do you support whole-cell biocatalyst assays?

    A: Absolutely. Our services cover catalytic and kinetic assays for purified enzymes, immobilized systems, and whole-cell biocatalysts, allowing evaluation of mass transfer effects, cofactor recycling, and real-process performance.
  • Q: How are results reported?

    A: Clients receive comprehensive, well-documented reports that include assay design, optimized conditions, kinetic parameters, raw and processed data, statistical analysis, and clear recommendations for further enzyme engineering or process optimization.

References:

  1. Crowther JM, Cross PJ, Oliver MR, et al. Structure–function analyses of two plant meso-diaminopimelate decarboxylase isoforms reveal that active-site gating provides stereochemical control. J Biol Chem. 2019;294(21):8505-8515. doi:10.1074/jbc.RA118.006825
  2. Hussain S, Leipold F, Man H, et al. An (R)-imine reductase biocatalyst for the asymmetric reduction of cyclic imines. ChemCatChem. 2015;7(4):579-583. doi:10.1002/cctc.201402797

For research and industrial use only. Not intended for personal medicinal use. Certain food-grade products are suitable for formulation development in food and related applications.

Services
Online Inquiry

For research and industrial use only. Not intended for personal medicinal use. Certain food-grade products are suitable for formulation development in food and related applications.